BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014F05SP1|AL426713
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1338 1576 0.0
>3x_Contig1338
Length = 8134
Score = 1576 bits (795), Expect = 0.0
Identities = 795/795 (100%)
Strand = Plus / Plus
Query: 1 gatcattgtttttactattatttacgacctattattattattgctctatatttactatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2644 gatcattgtttttactattatttacgacctattattattattgctctatatttactatta 2703
Query: 61 acacttttcgaacataatggtcgattttatgagaatacttacttcttccacttaacattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2704 acacttttcgaacataatggtcgattttatgagaatacttacttcttccacttaacattc 2763
Query: 121 aaatggagagttagtctaatccctaaaaatcggtaatagtatcatatattttctaaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2764 aaatggagagttagtctaatccctaaaaatcggtaatagtatcatatattttctaaattg 2823
Query: 181 tccatcaaacctttgatggagtgtcatagaatgcatgcaagatgcatctattgacaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2824 tccatcaaacctttgatggagtgtcatagaatgcatgcaagatgcatctattgacaaaag 2883
Query: 241 gaaacaacttaggaaatatataaatgaaaacttgtcagactgccatttgtacccacccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2884 gaaacaacttaggaaatatataaatgaaaacttgtcagactgccatttgtacccacccaa 2943
Query: 301 tacgtttgtcccctcacgaagaagtccacaaactgggcaaagatcatcgcgccaattaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2944 tacgtttgtcccctcacgaagaagtccacaaactgggcaaagatcatcgcgccaattaaa 3003
Query: 361 aggcggttcatgcaggagttaaaacaagaaaaaagccggtaagttcaaaaagcatagaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3004 aggcggttcatgcaggagttaaaacaagaaaaaagccggtaagttcaaaaagcatagaat 3063
Query: 421 cgaaattcctacttctaaaccaccaagctaagttctctatccatacacaaaccatatgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3064 cgaaattcctacttctaaaccaccaagctaagttctctatccatacacaaaccatatgca 3123
Query: 481 aaaggcaaagcaaaaatgtgggagtagatggccaaaccgctaagggttgtggaccaagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3124 aaaggcaaagcaaaaatgtgggagtagatggccaaaccgctaagggttgtggaccaagct 3183
Query: 541 aataatacattcttttttctcactcttgggtacaaaggttcttcggctcatcaaccaagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3184 aataatacattcttttttctcactcttgggtacaaaggttcttcggctcatcaaccaagt 3243
Query: 601 tggattcagtggctcttttgaagagtcaaagagtgacgattcctatagaaatgatcctat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3244 tggattcagtggctcttttgaagagtcaaagagtgacgattcctatagaaatgatcctat 3303
Query: 661 gaagtacgtcgacaactatttaagaataaatcaaaaaagatttaacataaacgcgcaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3304 gaagtacgtcgacaactatttaagaataaatcaaaaaagatttaacataaacgcgcaaca 3363
Query: 721 atagttttccaacatcttcccatcatacctcgccttttatactttttcaattggattatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3364 atagttttccaacatcttcccatcatacctcgccttttatactttttcaattggattatt 3423
Query: 781 tttcacatcagtcaa 795
|||||||||||||||
Sbjct: 3424 tttcacatcagtcaa 3438
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7101
Number of Sequences: 1807
Number of extensions: 7101
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)